Code

The codes related the NeuBtracker Project (both for acquisition and for analysis) are publicly available on Github

 

The uploaded software consists of modules for controlling the different hardware components during the acquisitions (a) using a Graphical User Interface (c-top),  a Quality Check and preprocessing step (c-middle) and a set of tools for analyzing the neuronal signals after registration of the image (c-bottom). The default pipeline can be seen in (b).

SoftwareWalkThrough

See Online Methods of the original publication on Nature Methods for more details (doi: 10.1038/nmeth.4459).